Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGCAAAAGGAGTTGGTGG
(((((((((((((((((((...&))))))..))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042461
GeneSymbolTRAPPC5
Binding site984,1006
Score1.0
Seed1
Au0.471
Energy-27.2
Binding len22
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure