Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTGGATGTGTGTGCTGGGG
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001042476
GeneSymbolCARHSP1
Binding site152,173
Score1.0
Seed1
Au0.368
Energy-17.2
Binding len13
Me-6.908
Phylopstem-0.5679615363636363
Phylopflank-0.31635782443749993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure