Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCGGGGGGCTGGGGTGGTG
..(((((.(((((.((((.((&)).))))))))).)).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001042476
GeneSymbolCARHSP1
Binding site1589,1609
Score0.923
Seed0
Au0.338
Energy-26.1
Binding len20
Me-8.127
Phylopstem-0.059872419999999996
Phylopflank-0.71562817125
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure