Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCTCCAAGGAAGGGGGCCT
....((((((((((((((((..&)))))...))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042478
GeneSymbolAJAP1
Binding site2253,2273
Score0.923
Seed0
Au0.412
Energy-22.5
Binding len20
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure