Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAAGGCAGGAGGATCATTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAGG
..(((((((((((((((((...&.)))))))))).............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042495
GeneSymbolSLC12A6
Binding site5005,5058
Score1.0
Seed1
Au0.426
Energy-26.7
Binding len32
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure