Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TATCCAGGAATATATGTCAGTGA
(((((((...((((((((((..&)))))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047433471
GeneSymbolCDH5
Binding site2687,2710
Score0.846
Seed1
Au0.588
Energy-21.6
Binding len23
Me-8.55
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure