Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGTCACCATCAAGCAGCTGCAC
.(((((((((((.((..((((&))))..)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348068
GeneSymbolDCTN2
Binding site1219,1244
Score0.846
Seed1
Au0.441
Energy-20.9
Binding len25
Me-5.316
Phylopstem2.58097025
Phylopflank2.60770958125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure