Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCGGGTTCAGCTGCAT
.(((((((((.(((((.((((&))))))))).)...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047433796
GeneSymbolSMG1
Binding site9776,9799
Score1.0
Seed1
Au0.529
Energy-24.0
Binding len23
Me-6.618
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure