Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGACAGCCTGGCTGTC
..(((((((.((((((..(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348091
GeneSymbolF11R
Binding site2526,2545
Score0.923
Seed1
Au0.485
Energy-22.0
Binding len19
Me-6.2
Phylopstem0.32833004285714285
Phylopflank0.36165609624999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure