Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTCCCGCTACCCCCCATTCCCTTCTGACTACCTGGCCCTGCAGCTGCC
..((((((((((..((.((((&.)))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047433989
GeneSymbolINO80E
Binding site671,724
Score0.923
Seed1
Au0.294
Energy-24.4
Binding len20
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure