Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGGCTGCAGTTTTGTGGT
((((((((((((((.(((((.&))))).)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047434143
GeneSymbolABCC1
Binding site5045,5068
Score0.923
Seed1
Au0.5
Energy-22.2
Binding len23
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure