Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCTGCTTCAGCTGTGAC
(((((((((.(((.((((((.&))).))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348107
GeneSymbolSPAAR
Binding site447,469
Score0.923
Seed1
Au0.353
Energy-20.1
Binding len22
Me-6.037
Phylopstem2.1893286666666665
Phylopflank0.7932878399999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure