Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGACTGGAAGGCCGAGGTGG
((((((((((..((((((((.(&).))))))))..)))..)))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047434336
GeneSymbolSMPD3
Binding site2209,2236
Score0.846
Seed1
Au0.426
Energy-25.3
Binding len27
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure