Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGAGCAGTGG
(((((.((((..(((((((((.&)))))))))..))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348119
GeneSymbolTRIM16
Binding site2934,2957
Score0.923
Seed0
Au0.353
Energy-27.6
Binding len23
Me-12.01
Phylopstem0.5277012555555555
Phylopflank0.21376027549999993
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure