Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGAATGGATGACCAGG
..((((((((.(((((((((.(&).))))))))).))).).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348119
GeneSymbolTRIM16
Binding site3275,3298
Score0.846
Seed1
Au0.544
Energy-25.6
Binding len23
Me-7.782
Phylopstem-0.8898237777777778
Phylopflank-0.4312505662500002
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure