Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCTTCTGCAAGAAAGCCTCTTTGCAACCGGGTCAGAATGGCGGCAGCGGA
((((.((((((((((((((((&.))))...)))))))...........))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047434468
GeneSymbolNPIPA3
Binding site1016,1069
Score0.846
Seed0
Au0.456
Energy-21.4
Binding len37
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure