Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCGCACTGTTGCCCAGGCTGGAGAGCAGTGG
(((((.((((..(((((((((.&.)))))))))..))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348122
GeneSymbolTRIM16
Binding site1718,1751
Score1.0
Seed0
Au0.353
Energy-27.6
Binding len24
Me-12.01
Phylopstem2.580133222222222
Phylopflank1.6257034524999998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure