Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGGCGGAAGTTGG
...(((((.(.((((((((((&)))))))))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047434511
GeneSymbolSLC6A2
Binding site4337,4356
Score0.846
Seed0
Au0.397
Energy-21.0
Binding len19
Me-10.396
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure