Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGGGTCTGCAGCTGA
...(((((((((.(.((((..&)))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047434511
GeneSymbolSLC6A2
Binding site5047,5064
Score0.962
Seed0
Au0.471
Energy-20.4
Binding len17
Me-8.539
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure