Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAGCCAACCATGCCTGCAGCTGCT
..((((((((((..(((.(((&.))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047434937
GeneSymbolVPS9D1
Binding site357,386
Score0.962
Seed1
Au0.338
Energy-24.0
Binding len19
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure