Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGGAATGTCTCGCAGTTTTTCCAGAAAGGAGGAGTCAAGGAAGCCCTTAGTGA
((((((((((((((((((.(((&.))).))))))))))))...............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348193
GeneSymbolRIOK3
Binding site1430,1487
Score0.846
Seed1
Au0.544
Energy-22.1
Binding len39
Me-3.938
Phylopstem5.44550521212121
Phylopflank4.6662221834625
Longest consecutive pairings12
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure