Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCTCACTGCAGCGTGG
...((((((((((.(((((((&)))).)))..)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348195
GeneSymbolGPR42
Binding site488,510
Score0.923
Seed0
Au0.426
Energy-20.2
Binding len22
Me-7.371
Phylopstem-0.39452788181818177
Phylopflank0.7645322937499999
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure