Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCGCCCAGCCTGGAGTATAGTGC
((((((((((...((((((...&.))))))...))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047436162
GeneSymbolPAFAH1B1
Binding site10,37
Score0.923
Seed1
Au0.455
Energy-22.9
Binding len22
Me-11.398
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end5
Position5UTR
2D Structure