Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGACTGTGGAGCCT
....((((((..((((((....&))))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047436241
GeneSymbolSLC25A39
Binding site8,25
Score0.846
Seed0
Au0.444
Energy-19.8
Binding len17
Me-15.718
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end4
Position5UTR
2D Structure