Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGGGTAGCCAGGTG
(((((((.(((..(((((....&))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047436331
GeneSymbolRNF43
Binding site4538,4555
Score0.846
Seed1
Au0.485
Energy-18.0
Binding len17
Me-10.887
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure