Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGGGCATTGCCTGCCAGC
..((((((..((((((......&.))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047436346
GeneSymbolVPS53
Binding site3743,3763
Score0.846
Seed1
Au0.426
Energy-17.2
Binding len16
Me-7.256
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure