Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCTAAAACTTCTCACAGAGCTGGGGAGTTGGTGG
(((((((((((((((((((((.&))))))..............))))...))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047436435
GeneSymbolPLXDC1
Binding site5122,5161
Score0.846
Seed1
Au0.5
Energy-24.6
Binding len39
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure