Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTGCGACTGTACACATAGCTGCAGC
((((((((((((((((((((.&))))))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348215
GeneSymbolTCF4
Binding site5834,5861
Score0.846
Seed1
Au0.691
Energy-22.8
Binding len27
Me-3.938
Phylopstem4.854590653846154
Phylopflank3.7505561462499992
Longest consecutive pairings12
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure