Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAATTGCAAGGTGGCCGGGTG
(((((((.(((..(((((....&.)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047436787
GeneSymbolPLEKHH3
Binding site2917,2939
Score0.846
Seed1
Au0.456
Energy-18.3
Binding len19
Me-10.887
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure