Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGCTCTTTGTAGAACATTTCTTTGGGGGAGTTGAGATCATTCTGCTCGTGGTGA
(((((((((((((((((((...&)))))).....................))))))))).................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348223
GeneSymbolOR4C5
Binding site357,415
Score0.846
Seed1
Au0.5
Energy-17.8
Binding len58
Me-3.938
Phylopstem0.4250663824561402
Phylopflank-0.10647283125000007
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end5
PositionCDS
2D Structure