Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCAGGAATCTATCAGAGAAGGGTTTCAGAAGCGCTGTTTGCCAGTT
.((((((.(((((((.((((((&.))))))..))))))).................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348247
GeneSymbolAIM2
Binding site289,340
Score0.846
Seed1
Au0.544
Energy-21.0
Binding len40
Me-6.34
Phylopstem-0.19116925714285707
Phylopflank0.2888669825
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure