Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTGCATCTGCAGCCATCAGAAATGATGTCGCAAAGCAACGTGCTGCAC
.(((((((((((.(((((((.&)))..)))).)))))))..............................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348247
GeneSymbolAIM2
Binding site193,245
Score0.846
Seed1
Au0.529
Energy-18.6
Binding len52
Me-5.082
Phylopstem-0.138218756097561
Phylopflank0.10584767624999997
Longest consecutive pairings7
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure