Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTCACTGCCACTAAAATCCACCCAGCCCACTAACTGAGGAGCTAGTGT
((((((((((((.((((((.((&.)).))))))..........)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348250
GeneSymbolSLC6A1
Binding site3168,3220
Score0.923
Seed1
Au0.5
Energy-28.3
Binding len33
Me-5.227
Phylopstem0.7903050166666671
Phylopflank0.09283861499999993
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure