Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGCCGCAAAACTGCT
..((((.(((((((.(((((.&))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348251
GeneSymbolSLC6A1
Binding site249,269
Score0.846
Seed0
Au0.353
Energy-21.4
Binding len20
Me-7.236
Phylopstem1.2481844285714285
Phylopflank1.4627952375000002
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure