Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCGCAACCGCAGAGAGCTCTTCATTGCTGCTGTCTGCAT
.(((((((((((((((.(((.&)))..)))))))))).....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348252
GeneSymbolSLC6A1
Binding site1319,1361
Score1.0
Seed1
Au0.471
Energy-23.5
Binding len42
Me-3.793
Phylopstem3.417240347222222
Phylopflank5.034329543750001
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end6
PositionCDS
2D Structure