Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCATTTGCCAGGA
.(((((((...((((.((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001348253
GeneSymbolSLC6A1
Binding site3045,3061
Score0.923
Seed1
Au0.471
Energy-17.3
Binding len16
Me-9.15
Phylopstem0.5167008571428571
Phylopflank0.5592378750000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure