Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGCCGAGGAGTCGGG
..(((((((((((((((((...&))))))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348253
GeneSymbolSLC6A1
Binding site49,71
Score0.885
Seed1
Au0.265
Energy-26.6
Binding len22
Me-4.957
Phylopstem0.24604180952380955
Phylopflank0.31261433025641033
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure