Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGTTCCCGCTGTCTCAGCCGCGGCGCAGA
((((.((((((((((...(((&.)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348310
GeneSymbolLRRFIP2
Binding site71,103
Score0.846
Seed0
Au0.25
Energy-24.7
Binding len23
Me-8.29
Phylopstem0.78039566
Phylopflank0.6561205450000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure