Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCCCCCACCTCACTACGAAGGGAGAAGGATGGGTCCACCAGTGG
((((((((((((((((((....&.)))).........)))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047438737
GeneSymbolHNRNPL
Binding site845,892
Score0.846
Seed1
Au0.353
Energy-22.0
Binding len42
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end4
PositionCDS
2D Structure