Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCTCACAGCTGCAGCAGTGGT
((((.(((((((((((.((((&)).)).))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047438745
GeneSymbolDNAJB1
Binding site286,309
Score0.846
Seed0
Au0.324
Energy-21.1
Binding len23
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position5UTR
2D Structure