Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCCAGCCAGCTGCT
..((((((..(((((..(((.&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047438745
GeneSymbolDNAJB1
Binding site122,140
Score0.846
Seed1
Au0.426
Energy-19.2
Binding len18
Me-7.489
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure