Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCTGGAGTACAGTGG
((((((((((..(((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047438786
GeneSymbolJAK3
Binding site4319,4340
Score0.846
Seed1
Au0.368
Energy-27.2
Binding len21
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure