Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTGGCTTAGCAGGTGCTGCAGCTGTAC
.(((((((((((((((.((((&.)))).)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348322
GeneSymbolTRIP12
Binding site9446,9477
Score0.846
Seed1
Au0.412
Energy-24.4
Binding len25
Me-3.793
Phylopstem3.866908055555556
Phylopflank3.321908837499999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure