Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCGTGCCGGGG
.((((((((....(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047438887
GeneSymbolNPAS1
Binding site630,646
Score0.923
Seed1
Au0.382
Energy-19.7
Binding len16
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure