Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAAACCACAGCATGCC
..(((((((.((((((((((.&)))))))).)).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047438993
GeneSymbolTRPM4
Binding site2635,2656
Score0.846
Seed1
Au0.412
Energy-23.6
Binding len21
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure