Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCCTTGCAACTCAGAGCTGCTGCAC
.((((((.((((((((((((.&.))))))))))....)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047439467
GeneSymbolITPKC
Binding site2863,2893
Score0.923
Seed1
Au0.338
Energy-26.2
Binding len25
Me-6.107
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure