Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTAGCAGGTGCTGCAGCTGTAC
.(((((((((((((((.((((&)))).)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348331
GeneSymbolTRIP12
Binding site9113,9137
Score0.808
Seed1
Au0.412
Energy-24.0
Binding len24
Me-3.793
Phylopstem5.2604865555555556
Phylopflank4.68801441125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure