Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTGGGACAGCCACAGCTGCC
..(((((((.((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348331
GeneSymbolTRIP12
Binding site3078,3101
Score0.923
Seed1
Au0.426
Energy-23.6
Binding len16
Me-6.2
Phylopstem1.1700715714285714
Phylopflank1.6161212249999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure