Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACAGATTTGATGGGCAGAGGGAGGGAAGTATGCTAGGTG
(((((((((((...........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001348336
GeneSymbolTRIP12
Binding site1489,1531
Score0.923
Seed1
Au0.588
Energy-18.4
Binding len13
Me-10.399
Phylopstem-0.029746363636363658
Phylopflank-0.09559896375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure