Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCAGCTGCTCGGACAGATGAAGCTCCCCAAGGAGCTGCAGG
(((((((((((((((.((((.&)))))))))))........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348336
GeneSymbolTRIP12
Binding site1406,1450
Score0.846
Seed1
Au0.515
Energy-21.0
Binding len44
Me-4.171
Phylopstem-0.0894960512820513
Phylopflank-0.05007272875
Longest consecutive pairings11
Position of longest consecutive pairings33
Pairings in 3prime end6
PositionCDS
2D Structure